Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 AC164567.1-201ENSMUST00000219185 960 ntBASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Chrna9G3X8Z7 Sybu-209ENSMUST00000228639 4113 ntBASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Gm37153-201ENSMUST00000193637 231 ntBASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Gm43767-201ENSMUST00000198933 381 ntBASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.34■□□□□ 0.21
Chrna9G3X8Z7 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
Chrna9G3X8Z7 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Chrna9G3X8Z7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Mxra8os-201ENSMUST00000097740 687 ntBASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Chrna9G3X8Z7 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Chrna9G3X8Z7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Chrna9G3X8Z7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms