Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NpcdF8VQB8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Gm18049-201ENSMUST00000208909 581 ntBASIC18.25■□□□□ 0.51
NpcdF8VQB8 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Gm9899-201ENSMUST00000065519 555 ntBASIC18.25■□□□□ 0.51
NpcdF8VQB8 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.25■□□□□ 0.51
NpcdF8VQB8 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NpcdF8VQB8 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gm12859-201ENSMUST00000117834 427 ntBASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gm11478-201ENSMUST00000117851 599 ntBASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.24■□□□□ 0.51
NpcdF8VQB8 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gm29541-201ENSMUST00000191351 678 ntBASIC18.24■□□□□ 0.51
NpcdF8VQB8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.24■□□□□ 0.51
NpcdF8VQB8 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NpcdF8VQB8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Gm18062-201ENSMUST00000208020 547 ntBASIC18.23■□□□□ 0.51
NpcdF8VQB8 Gm18055-201ENSMUST00000208254 547 ntBASIC18.23■□□□□ 0.51
NpcdF8VQB8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NpcdF8VQB8 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
NpcdF8VQB8 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms