Protein–RNA interactions for Protein: F7BCN0

Gm28048, Predicted gene, 28048 (Fragment), mousemouse

Predictions only

Length 99 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28048F7BCN0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Gm28048F7BCN0 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm22697-201ENSMUST00000175194 63 ntBASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm29257-201ENSMUST00000186115 639 ntBASIC14.07□□□□□ -0.16
Gm28048F7BCN0 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Gm28048F7BCN0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Mir770-201ENSMUST00000103252 94 ntBASIC14.06□□□□□ -0.16
Gm28048F7BCN0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Gm18101-201ENSMUST00000215769 548 ntBASIC14.06□□□□□ -0.16
Gm28048F7BCN0 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Gm28048F7BCN0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 AL672049.1-201ENSMUST00000197943 91 ntBASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Gm28048F7BCN0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms