Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Pcdhb9E9Q5G2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Rpph1-201ENSMUST00000175096 319 ntBASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Gm27702-201ENSMUST00000184512 56 ntBASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Gm43767-201ENSMUST00000198933 381 ntBASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhb9E9Q5G2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Gm14822-201ENSMUST00000122247 291 ntBASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhb9E9Q5G2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb9E9Q5G2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb9E9Q5G2 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.83■□□□□ 0.45
Pcdhb9E9Q5G2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb9E9Q5G2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb9E9Q5G2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhb9E9Q5G2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhb9E9Q5G2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Gm13410-201ENSMUST00000117058 1415 ntBASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Gm43575-201ENSMUST00000196420 516 ntBASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Gm5867-201ENSMUST00000063197 592 ntBASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb9E9Q5G2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms