Protein–RNA interactions for Protein: E9PZM4

Chd2, Chromodomain-helicase-DNA-binding protein 2, mousemouse

Known RBP Predictions only

Length 1,827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd2E9PZM4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd2E9PZM4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.6■□□□□ 0.89
Chd2E9PZM4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd2E9PZM4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd2E9PZM4 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC20.6■□□□□ 0.89
Chd2E9PZM4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Chd2E9PZM4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.59■□□□□ 0.89
Chd2E9PZM4 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Gm8835-201ENSMUST00000173096 1169 ntBASIC20.59■□□□□ 0.89
Chd2E9PZM4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Gm2495-201ENSMUST00000191160 466 ntBASIC20.59■□□□□ 0.89
Chd2E9PZM4 Gm8463-201ENSMUST00000208573 613 ntBASIC20.59■□□□□ 0.89
Chd2E9PZM4 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd2E9PZM4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC20.58■□□□□ 0.89
Chd2E9PZM4 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Mir1982-201ENSMUST00000157368 74 ntBASIC20.58■□□□□ 0.89
Chd2E9PZM4 Gm27892-201ENSMUST00000185017 106 ntBASIC20.58■□□□□ 0.89
Chd2E9PZM4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd2E9PZM4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Chd2E9PZM4 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Gm45667-201ENSMUST00000210380 1316 ntBASIC20.57■□□□□ 0.88
Chd2E9PZM4 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Chd2E9PZM4 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd2E9PZM4 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd2E9PZM4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd2E9PZM4 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Mir1247-201ENSMUST00000116706 82 ntBASIC20.55■□□□□ 0.88
Chd2E9PZM4 AC121804.3-201ENSMUST00000223420 295 ntBASIC20.55■□□□□ 0.88
Chd2E9PZM4 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd2E9PZM4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd2E9PZM4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms