Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdh17E9PXF0 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdh17E9PXF0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Pcdh17E9PXF0 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.15□□□□□ -0.15
Pcdh17E9PXF0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Pcdh17E9PXF0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms