Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Gm28043E0CXC2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 BC037039-201ENSMUST00000192003 2205 ntBASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Gm28043E0CXC2 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.28■□□□□ 0.04
Gm28043E0CXC2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Gm28043E0CXC2 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Gm28043E0CXC2 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms