Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim30cD3YVI9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Trim30cD3YVI9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim30cD3YVI9 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Trim30cD3YVI9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trim30cD3YVI9 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Gm25745-201ENSMUST00000174945 133 ntBASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim30cD3YVI9 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim30cD3YVI9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim30cD3YVI9 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.61■□□□□ 0.25
Trim30cD3YVI9 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms