Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Clrn2B2RVW2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.56■□□□□ 0.4
Clrn2B2RVW2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Gm27920-201ENSMUST00000183953 96 ntBASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Gm27306-201ENSMUST00000183970 107 ntBASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Arhgef33-209ENSMUST00000225223 714 ntBASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Clrn2B2RVW2 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Gm42934-201ENSMUST00000196920 1345 ntBASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Wdyhv1-203ENSMUST00000226889 394 ntBASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Clrn2B2RVW2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gm13453-201ENSMUST00000118708 357 ntBASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gm11424-201ENSMUST00000121929 829 ntBASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 AC140375.2-201ENSMUST00000225283 584 ntBASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Clrn2B2RVW2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.52■□□□□ 0.4
Clrn2B2RVW2 Mir8102-201ENSMUST00000184148 139 ntBASIC17.52■□□□□ 0.4
Clrn2B2RVW2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Clrn2B2RVW2 AC164567.1-201ENSMUST00000219185 960 ntBASIC17.52■□□□□ 0.4
Clrn2B2RVW2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms