Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Shroom2A2ALU4 AC125117.1-201ENSMUST00000228121 468 ntBASIC23.62■■□□□ 1.37
Shroom2A2ALU4 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Gm24196-201ENSMUST00000179161 110 ntBASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Gm38266-201ENSMUST00000194931 421 ntBASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Gm5279-201ENSMUST00000199575 745 ntBASIC23.61■■□□□ 1.37
Shroom2A2ALU4 AC155637.1-201ENSMUST00000218560 636 ntBASIC23.61■■□□□ 1.37
Shroom2A2ALU4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Gm43118-201ENSMUST00000199149 775 ntBASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Gm43758-201ENSMUST00000199500 367 ntBASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Gm7287-201ENSMUST00000205267 602 ntBASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Gm9823-201ENSMUST00000051212 327 ntBASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Shroom2A2ALU4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC23.59■■□□□ 1.37
Shroom2A2ALU4 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Gm42442-201ENSMUST00000197951 1133 ntBASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Gm45930-201ENSMUST00000221330 292 ntBASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Shroom2A2ALU4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Gm43702-201ENSMUST00000198772 2546 ntBASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Gm7553-201ENSMUST00000185805 1426 ntBASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Shroom2A2ALU4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Shroom2A2ALU4 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Shroom2A2ALU4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
Shroom2A2ALU4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
Shroom2A2ALU4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shroom2A2ALU4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shroom2A2ALU4 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC23.57■■□□□ 1.36
Shroom2A2ALU4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
Shroom2A2ALU4 Gm44729-201ENSMUST00000206759 2052 ntBASIC23.57■■□□□ 1.36
Shroom2A2ALU4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Shroom2A2ALU4 Gm12585-201ENSMUST00000117307 290 ntBASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Gm8565-201ENSMUST00000183259 1014 ntBASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Gm9176-201ENSMUST00000219955 1120 ntBASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Shroom2A2ALU4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms