Protein–RNA interactions for Protein: A0A0N4SVP8

Gm5580, Predicted pseudogene 5580, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5580A0A0N4SVP8 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Gm8344-201ENSMUST00000119813 856 ntBASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Gm5580A0A0N4SVP8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Gm27704-201ENSMUST00000185094 107 ntBASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Gm5580A0A0N4SVP8 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Gm5580A0A0N4SVP8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm12497-201ENSMUST00000138778 237 ntBASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Gm5580A0A0N4SVP8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Ank2-226ENSMUST00000189368 339 ntBASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Gm5580A0A0N4SVP8 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Gm5580A0A0N4SVP8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms