Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm11336-201ENSMUST00000118168 334 ntBASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 AC122351.1-201ENSMUST00000220467 126 ntBASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm7370-201ENSMUST00000219471 767 ntBASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Trav3n-3A0A0G2JEM0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms