Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm43347-201ENSMUST00000200226 580 ntBASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Trav9n-2A0A0G2JDP3 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm43352-201ENSMUST00000196419 3065 ntBASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 AC122024.2-201ENSMUST00000220086 871 ntBASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm37584-201ENSMUST00000193595 1290 ntBASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 AC159093.1-201ENSMUST00000227779 380 ntBASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav9n-2A0A0G2JDP3 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms