Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm13474-201ENSMUST00000122466 815 ntBASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.86□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Spcs1-207ENSMUST00000228767 1008 ntBASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC11.85□□□□□ -0.51
Trbv13-3A0A0B4J1H2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms