Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Gm9987-201ENSMUST00000069768 567 ntBASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 AC153937.1-201ENSMUST00000218734 412 ntBASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Trav13-4-dv7A0A075B6C2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms