Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Gm3272-201ENSMUST00000181181 1229 ntBASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Gm10566-201ENSMUST00000086739 996 ntBASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Trav6-5A0A075B6B5 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gm21814-202ENSMUST00000203277 873 ntBASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Arhgef4-208ENSMUST00000211073 171 ntBASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6-5A0A075B6B5 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6-5A0A075B6B5 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Gm26039-201ENSMUST00000158152 144 ntBASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms