Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav6d-7A0A075B6B0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm11452-201ENSMUST00000122376 690 ntBASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm1818-201ENSMUST00000169406 1184 ntBASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm38058-201ENSMUST00000194323 4368 ntBASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav6d-7A0A075B6B0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-7A0A075B6B0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-7A0A075B6B0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-7A0A075B6B0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-7A0A075B6B0 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav6d-7A0A075B6B0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm13884-201ENSMUST00000118103 829 ntBASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm27867-201ENSMUST00000184778 125 ntBASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm44771-201ENSMUST00000206975 626 ntBASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6d-7A0A075B6B0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6d-7A0A075B6B0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms