Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trav16A0A075B653 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.78□□□□□ -0.52
Trav16A0A075B653 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 CT009713.7-201ENSMUST00000224689 571 ntBASIC11.78□□□□□ -0.52
Trav16A0A075B653 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.78□□□□□ -0.52
Trav16A0A075B653 CT025689.6-201ENSMUST00000224991 1104 ntBASIC11.78□□□□□ -0.52
Trav16A0A075B653 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.78□□□□□ -0.52
Trav16A0A075B653 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav16A0A075B653 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.77□□□□□ -0.52
Trav16A0A075B653 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Trav16A0A075B653 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.77□□□□□ -0.53
Trav16A0A075B653 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav16A0A075B653 Gm5357-201ENSMUST00000212720 1924 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms