Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trav5-4A0A075B652 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 Prkcz2-201ENSMUST00000206136 1756 ntBASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trav5-4A0A075B652 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trav5-4A0A075B652 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 AC124569.2-201ENSMUST00000225998 818 ntBASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.76□□□□□ -0.37
Trav5-4A0A075B652 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trav5-4A0A075B652 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trav5-4A0A075B652 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms