Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm12008-201ENSMUST00000117791 755 ntBASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Mir6956-201ENSMUST00000183598 62 ntBASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm19891-201ENSMUST00000189771 303 ntBASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm5312-201ENSMUST00000203728 547 ntBASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Nr1h3Q9Z0Y9 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm14722-201ENSMUST00000118943 689 ntBASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm13365-201ENSMUST00000121188 973 ntBASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Nr1h3Q9Z0Y9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm14057-201ENSMUST00000120631 482 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Rprl2-201ENSMUST00000157150 290 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm44335-201ENSMUST00000196879 141 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm44297-201ENSMUST00000198304 141 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm44346-201ENSMUST00000198851 141 ntBASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Nr1h3Q9Z0Y9 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm8318-201ENSMUST00000182954 872 ntBASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 AC073947.1-201ENSMUST00000216991 649 ntBASIC16.5■□□□□ 0.23
Nr1h3Q9Z0Y9 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms