Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm18187-201ENSMUST00000196476 984 ntBASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Gm43433-201ENSMUST00000196573 481 ntBASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Lhx6Q9R1R0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx6Q9R1R0 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx6Q9R1R0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Lhx6Q9R1R0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Lhx6Q9R1R0 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Lhx6Q9R1R0 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gm44492-201ENSMUST00000197012 141 ntBASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gm44270-201ENSMUST00000203084 1234 ntBASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Lhx6Q9R1R0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Gm15171-201ENSMUST00000122191 334 ntBASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Gm27622-201ENSMUST00000183779 60 ntBASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 AC153932.1-201ENSMUST00000218558 787 ntBASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Tas2r113-201ENSMUST00000079035 930 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Gm37863-201ENSMUST00000194911 1457 ntBASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Lhx6Q9R1R0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Gm44552-201ENSMUST00000205458 1247 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.43□□□□□ -0.1
Lhx6Q9R1R0 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms