Protein–RNA interactions for Protein: Q9R1N9

Col13a1, Collagen alpha-1(XIII) chain, mousemouse

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1Q9R1N9 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Gm5177-201ENSMUST00000183092 997 ntBASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col13a1Q9R1N9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Rprl2-201ENSMUST00000157150 290 ntBASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm27430-201ENSMUST00000184585 107 ntBASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm44333-201ENSMUST00000197168 107 ntBASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gm7774-201ENSMUST00000200064 533 ntBASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Grk6-207ENSMUST00000225925 2769 ntBASIC12.97□□□□□ -0.33
Col13a1Q9R1N9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.96□□□□□ -0.33
Col13a1Q9R1N9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms