Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Clcf1Q9QZM3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Asic1-205ENSMUST00000228185 1818 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Gm15358-201ENSMUST00000119249 520 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Gm14140-201ENSMUST00000119999 995 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 AC154412.1-201ENSMUST00000226540 2786 ntBASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Clcf1Q9QZM3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 App-207ENSMUST00000227737 2827 ntBASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Gm37153-201ENSMUST00000193637 231 ntBASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Gm19164-201ENSMUST00000210667 640 ntBASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Clcf1Q9QZM3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clcf1Q9QZM3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Clcf1Q9QZM3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Clcf1Q9QZM3 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Clcf1Q9QZM3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Clcf1Q9QZM3 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Gm42901-201ENSMUST00000197735 3171 ntBASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Gm8000-201ENSMUST00000188378 592 ntBASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Clcf1Q9QZM3 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms