Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom3Q9QXN0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Shroom3Q9QXN0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Gm14701-201ENSMUST00000117156 348 ntBASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Shroom3Q9QXN0 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Gm45167-201ENSMUST00000208007 322 ntBASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Shroom3Q9QXN0 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Shroom3Q9QXN0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms