Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Chaf1aQ9QWF0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1aQ9QWF0 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1aQ9QWF0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1aQ9QWF0 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Chaf1aQ9QWF0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Chaf1aQ9QWF0 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm8825-201ENSMUST00000182565 998 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm4518-201ENSMUST00000182638 718 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm27867-201ENSMUST00000184778 125 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm44454-201ENSMUST00000198541 138 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 AC127302.2-201ENSMUST00000215212 268 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Chaf1aQ9QWF0 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chaf1aQ9QWF0 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms