Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SrfQ9JM73 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SrfQ9JM73 Gm7488-201ENSMUST00000117148 684 ntBASIC14.31□□□□□ -0.12
SrfQ9JM73 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SrfQ9JM73 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.31□□□□□ -0.12
SrfQ9JM73 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
SrfQ9JM73 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.31□□□□□ -0.12
SrfQ9JM73 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SrfQ9JM73 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.31□□□□□ -0.12
SrfQ9JM73 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SrfQ9JM73 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.3□□□□□ -0.12
SrfQ9JM73 Gm27838-201ENSMUST00000184829 128 ntBASIC14.3□□□□□ -0.12
SrfQ9JM73 Gm9063-201ENSMUST00000223299 582 ntBASIC14.3□□□□□ -0.12
SrfQ9JM73 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.3□□□□□ -0.12
SrfQ9JM73 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Gm2423-201ENSMUST00000074863 733 ntBASIC14.3□□□□□ -0.12
SrfQ9JM73 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SrfQ9JM73 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SrfQ9JM73 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Gm44344-201ENSMUST00000200287 129 ntBASIC14.29□□□□□ -0.12
SrfQ9JM73 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SrfQ9JM73 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SrfQ9JM73 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
SrfQ9JM73 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14.28□□□□□ -0.12
SrfQ9JM73 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
SrfQ9JM73 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Gm14719-201ENSMUST00000121891 340 ntBASIC14.28□□□□□ -0.12
SrfQ9JM73 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SrfQ9JM73 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SrfQ9JM73 Gm27533-201ENSMUST00000183800 152 ntBASIC14.28□□□□□ -0.12
SrfQ9JM73 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.28□□□□□ -0.12
SrfQ9JM73 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SrfQ9JM73 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms