Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ldb3Q9JKS4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Gm43352-201ENSMUST00000196419 3065 ntBASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ldb3Q9JKS4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gm27300-201ENSMUST00000184085 97 ntBASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gm27335-201ENSMUST00000184758 97 ntBASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ldb3Q9JKS4 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ldb3Q9JKS4 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms