Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Rhox4bQ9JI43 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Trmt13-210ENSMUST00000198454 880 ntBASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Timm23-208ENSMUST00000226683 750 ntBASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Rhox4bQ9JI43 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rhox4bQ9JI43 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Rhox4bQ9JI43 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Gm11539-201ENSMUST00000119837 557 ntBASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Gm29707-201ENSMUST00000196325 491 ntBASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rhox4bQ9JI43 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms