Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb3Q9ERD7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.16■□□□□ 0.02
Tubb3Q9ERD7 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb3Q9ERD7 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Tubb3Q9ERD7 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tubb3Q9ERD7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.16■□□□□ 0.02
Tubb3Q9ERD7 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm8097-201ENSMUST00000117903 829 ntBASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm13418-201ENSMUST00000119097 944 ntBASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm18206-201ENSMUST00000207027 926 ntBASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Tubb3Q9ERD7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Gm25990-201ENSMUST00000102440 86 ntBASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Tubb3Q9ERD7 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Gm15173-201ENSMUST00000122049 433 ntBASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Tubb3Q9ERD7 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms