Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rtp4Q9ER80 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Gm4995-201ENSMUST00000117247 432 ntBASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Gm9727-201ENSMUST00000161387 555 ntBASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Gm2213-201ENSMUST00000197485 688 ntBASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rtp4Q9ER80 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rtp4Q9ER80 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 AC084391.1-201ENSMUST00000200651 141 ntBASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Rtp4Q9ER80 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.26□□□□□ -0.13
Rtp4Q9ER80 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms