Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Nkx2-4Q9EQM3 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Nkx2-4Q9EQM3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm18018-201ENSMUST00000198273 408 ntBASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Shd-206ENSMUST00000225145 998 ntBASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm9899-201ENSMUST00000065519 555 ntBASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Nkx2-4Q9EQM3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Gm13829-201ENSMUST00000119600 138 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Mir1938-201ENSMUST00000158746 100 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Gm14026-201ENSMUST00000120625 1789 ntBASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx2-4Q9EQM3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx2-4Q9EQM3 Gm14042-201ENSMUST00000120139 833 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms