Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Vps35Q9EQH3 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Vps35Q9EQH3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Gm12350-201ENSMUST00000121208 462 ntBASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Gm5682-201ENSMUST00000173402 505 ntBASIC15.27■□□□□ 0.04
Vps35Q9EQH3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Vps35Q9EQH3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps35Q9EQH3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps35Q9EQH3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps35Q9EQH3 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps35Q9EQH3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.27■□□□□ 0.03
Vps35Q9EQH3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Vps35Q9EQH3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.26■□□□□ 0.03
Vps35Q9EQH3 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Vps35Q9EQH3 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Vps35Q9EQH3 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms