Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cpsf1Q9EPU4 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Gm8749-201ENSMUST00000117737 331 ntBASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cpsf1Q9EPU4 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Tcf21-202ENSMUST00000218002 1788 ntBASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Mir7023-201ENSMUST00000185093 64 ntBASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cpsf1Q9EPU4 AC154767.3-201ENSMUST00000225150 1342 ntBASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Fgf17-202ENSMUST00000227123 1336 ntBASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Gm13015-201ENSMUST00000118674 204 ntBASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Gm29541-201ENSMUST00000191351 678 ntBASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 AC164565.1-201ENSMUST00000217520 1484 ntBASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cpsf1Q9EPU4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Trav13-3-201ENSMUST00000117226 336 ntBASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Gm11543-201ENSMUST00000120758 370 ntBASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 AC126408.1-201ENSMUST00000225184 523 ntBASIC20.83■□□□□ 0.93
Cpsf1Q9EPU4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf1Q9EPU4 Gm14780-201ENSMUST00000118387 2737 ntBASIC20.83■□□□□ 0.92
Cpsf1Q9EPU4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cpsf1Q9EPU4 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Gm22175-201ENSMUST00000175007 78 ntBASIC20.82■□□□□ 0.92
Cpsf1Q9EPU4 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms