Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Hmgn3Q9DCB1 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn3Q9DCB1 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn3Q9DCB1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Hmgn3Q9DCB1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn3Q9DCB1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Hmgn3Q9DCB1 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Spcs1-207ENSMUST00000228767 1008 ntBASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Hmgn3Q9DCB1 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Gm44645-201ENSMUST00000205492 1653 ntBASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn3Q9DCB1 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Gm4217-201ENSMUST00000182243 1002 ntBASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn3Q9DCB1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms