Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm13418-201ENSMUST00000119097 944 ntBASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Gtf3c6Q9D8P7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Gm6089-201ENSMUST00000197666 938 ntBASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Gm43399-201ENSMUST00000202546 2374 ntBASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Gm30437-201ENSMUST00000206086 1201 ntBASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Gtf3c6Q9D8P7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Gm25990-201ENSMUST00000102440 86 ntBASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Gtf3c6Q9D8P7 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gm7901-201ENSMUST00000120430 1597 ntBASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Rps4l-201ENSMUST00000071745 943 ntBASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Gtf3c6Q9D8P7 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms