Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Chmp4bQ9D8B3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Chmp4bQ9D8B3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Grk6-207ENSMUST00000225925 2769 ntBASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Gm7862-201ENSMUST00000121461 292 ntBASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Gm7787-201ENSMUST00000216858 688 ntBASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Gm10819-201ENSMUST00000099988 561 ntBASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Chmp4bQ9D8B3 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Mir8098-201ENSMUST00000184011 137 ntBASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Chmp4bQ9D8B3 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.14■□□□□ 0.66
Chmp4bQ9D8B3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Chmp4bQ9D8B3 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Gm9682-201ENSMUST00000197505 556 ntBASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Chmp4bQ9D8B3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Gm10584-201ENSMUST00000207036 2628 ntBASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Chmp4bQ9D8B3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms