Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ShpkQ9D5J6 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Gm18666-201ENSMUST00000190039 958 ntBASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
ShpkQ9D5J6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Gm5874-201ENSMUST00000096101 508 ntBASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.74□□□□□ -0.37
ShpkQ9D5J6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Gm11539-201ENSMUST00000119837 557 ntBASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ShpkQ9D5J6 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms