Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.67■□□□□ 0.26
Snx29Q9D3S3 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm13015-201ENSMUST00000118674 204 ntBASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm17837-201ENSMUST00000186435 985 ntBASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm29541-201ENSMUST00000191351 678 ntBASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm43767-201ENSMUST00000198933 381 ntBASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 CT025535.1-201ENSMUST00000227172 491 ntBASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Snx29Q9D3S3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Gm27437-201ENSMUST00000183429 107 ntBASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Mir8102-201ENSMUST00000184148 139 ntBASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Gm5186-201ENSMUST00000218781 920 ntBASIC16.65■□□□□ 0.26
Snx29Q9D3S3 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Snx29Q9D3S3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Snx29Q9D3S3 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snx29Q9D3S3 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snx29Q9D3S3 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms