Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk1aQ9D132 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk1aQ9D132 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk1aQ9D132 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Upk1aQ9D132 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Upk1aQ9D132 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Gm29518-201ENSMUST00000190858 372 ntBASIC14.46□□□□□ -0.09
Upk1aQ9D132 Gm17808-201ENSMUST00000200859 894 ntBASIC14.46□□□□□ -0.09
Upk1aQ9D132 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Upk1aQ9D132 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk1aQ9D132 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.46□□□□□ -0.1
Upk1aQ9D132 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Upk1aQ9D132 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk1aQ9D132 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
Upk1aQ9D132 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Upk1aQ9D132 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.45□□□□□ -0.1
Upk1aQ9D132 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.45□□□□□ -0.1
Upk1aQ9D132 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Gm45328-201ENSMUST00000210942 917 ntBASIC14.45□□□□□ -0.1
Upk1aQ9D132 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.45□□□□□ -0.1
Upk1aQ9D132 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Upk1aQ9D132 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Gm43195-201ENSMUST00000200614 2332 ntBASIC14.44□□□□□ -0.1
Upk1aQ9D132 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Celf4-206ENSMUST00000224553 1729 ntBASIC14.44□□□□□ -0.1
Upk1aQ9D132 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Upk1aQ9D132 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Upk1aQ9D132 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms