Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd1Q9D0E3 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Gm6222-201ENSMUST00000120787 396 ntBASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Gm8652-201ENSMUST00000181363 964 ntBASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Gm29127-201ENSMUST00000188304 517 ntBASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Gm9182-201ENSMUST00000217829 639 ntBASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Lysmd1Q9D0E3 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Lysmd1Q9D0E3 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Gm27516-201ENSMUST00000184237 98 ntBASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Gm43289-201ENSMUST00000200537 1475 ntBASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Lysmd1Q9D0E3 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Gm27514-201ENSMUST00000183692 110 ntBASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Gm29649-201ENSMUST00000185649 419 ntBASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Gm9823-201ENSMUST00000051212 327 ntBASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Lysmd1Q9D0E3 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Gm44364-201ENSMUST00000198368 141 ntBASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Lysmd1Q9D0E3 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Lysmd1Q9D0E3 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms