Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rpusd4Q9CWX4 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Gm6858-201ENSMUST00000208582 1468 ntBASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Umpk-ps-201ENSMUST00000211897 827 ntBASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Rpusd4Q9CWX4 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Gm7153-201ENSMUST00000117092 455 ntBASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Gm15165-201ENSMUST00000118140 502 ntBASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Gm16425-201ENSMUST00000118143 3130 ntBASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Rpusd4Q9CWX4 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Mir6404-201ENSMUST00000183699 94 ntBASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Gm37660-201ENSMUST00000192754 1732 ntBASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Gm34391-201ENSMUST00000203706 907 ntBASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Rpusd4Q9CWX4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms