Protein–RNA interactions for Protein: Q9CRC8

Lrrc40, Leucine-rich repeat-containing protein 40, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc40Q9CRC8 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lrrc40Q9CRC8 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
Lrrc40Q9CRC8 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gm8242-201ENSMUST00000193029 1420 ntBASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Lrrc40Q9CRC8 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 CT009510.1-201ENSMUST00000227972 270 ntBASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Birc2-201ENSMUST00000054878 378 ntBASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Lrrc40Q9CRC8 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms