Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm27628-201ENSMUST00000184911 107 ntBASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm43037-201ENSMUST00000196808 250 ntBASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retreg3Q9CQV4 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gm11764-201ENSMUST00000120221 623 ntBASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gm36943-201ENSMUST00000194422 282 ntBASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Retreg3Q9CQV4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gm11779-201ENSMUST00000118541 368 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gm10499-201ENSMUST00000174094 934 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gm27702-201ENSMUST00000184512 56 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Gm7901-201ENSMUST00000120430 1597 ntBASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
Retreg3Q9CQV4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 AC157650.3-201ENSMUST00000225058 1476 ntBASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retreg3Q9CQV4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms