Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm12620-201ENSMUST00000119791 1986 ntBASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gm12612-201ENSMUST00000140182 1986 ntBASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RTRAFQ9CQE8 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RTRAFQ9CQE8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RTRAFQ9CQE8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RTRAFQ9CQE8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms