Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Gm8097-201ENSMUST00000117903 829 ntBASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 AC093926.2-201ENSMUST00000214468 1228 ntBASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
H2afb1Q9CQ70 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm17807-201ENSMUST00000186869 298 ntBASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
H2afb1Q9CQ70 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.48□□□□□ -0.41
H2afb1Q9CQ70 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Grk6-207ENSMUST00000225925 2769 ntBASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Gm5357-201ENSMUST00000212720 1924 ntBASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Gm8318-201ENSMUST00000182954 872 ntBASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
H2afb1Q9CQ70 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms