Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Mrpl54Q9CPW3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Gm15378-201ENSMUST00000121894 207 ntBASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Timm23-208ENSMUST00000226683 750 ntBASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Mrpl54Q9CPW3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 AC175538.1-201ENSMUST00000225343 1269 ntBASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Mrpl54Q9CPW3 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.52□□□□□ -0.24
Mrpl54Q9CPW3 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mrpl54Q9CPW3 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mrpl54Q9CPW3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mrpl54Q9CPW3 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Mrpl54Q9CPW3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Mrpl54Q9CPW3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Gm42569-201ENSMUST00000200539 472 ntBASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Mrpl54Q9CPW3 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms