Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Gm45841-201ENSMUST00000207700 164 ntBASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 AC238811.3-201ENSMUST00000225422 709 ntBASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Mir1897-201ENSMUST00000122581 272 ntBASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdh23Q99PF4 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh23Q99PF4 Gm12742-201ENSMUST00000117326 410 ntBASIC15.33■□□□□ 0.05
Cdh23Q99PF4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Cdh23Q99PF4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh23Q99PF4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh23Q99PF4 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdh23Q99PF4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Gm6756-201ENSMUST00000180647 1620 ntBASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdh23Q99PF4 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Gm9002-201ENSMUST00000178437 499 ntBASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Gm3786-201ENSMUST00000202659 378 ntBASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Gm9797-201ENSMUST00000052902 613 ntBASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Gm9522-201ENSMUST00000182394 926 ntBASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdh23Q99PF4 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdh23Q99PF4 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms