Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cstf3Q99LI7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cstf3Q99LI7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Gm15358-201ENSMUST00000119249 520 ntBASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC14.74□□□□□ -0.05
Cstf3Q99LI7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cstf3Q99LI7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cstf3Q99LI7 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms