Protein–RNA interactions for Protein: Q99LG0

Usp16, Ubiquitin carboxyl-terminal hydrolase 16, mousemouse

Predictions only

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp16Q99LG0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp16Q99LG0 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp16Q99LG0 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.43■□□□□ 0.7
Usp16Q99LG0 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.43■□□□□ 0.7
Usp16Q99LG0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp16Q99LG0 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Gm17271-201ENSMUST00000165535 355 ntBASIC19.42■□□□□ 0.7
Usp16Q99LG0 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Thap2-203ENSMUST00000218989 527 ntBASIC19.42■□□□□ 0.7
Usp16Q99LG0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Gm8242-201ENSMUST00000193029 1420 ntBASIC19.42■□□□□ 0.7
Usp16Q99LG0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp16Q99LG0 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp16Q99LG0 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Gm16198-201ENSMUST00000118766 670 ntBASIC19.4■□□□□ 0.7
Usp16Q99LG0 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Gm5867-201ENSMUST00000063197 592 ntBASIC19.4■□□□□ 0.7
Usp16Q99LG0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp16Q99LG0 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms