Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
RtcbQ99LF4 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RtcbQ99LF4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC18.73■□□□□ 0.59
RtcbQ99LF4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
RtcbQ99LF4 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.72■□□□□ 0.59
RtcbQ99LF4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Gm12859-201ENSMUST00000117834 427 ntBASIC18.72■□□□□ 0.59
RtcbQ99LF4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Gm24694-201ENSMUST00000180054 110 ntBASIC18.72■□□□□ 0.59
RtcbQ99LF4 Gm27663-201ENSMUST00000184839 110 ntBASIC18.72■□□□□ 0.59
RtcbQ99LF4 Gm28631-201ENSMUST00000190740 334 ntBASIC18.72■□□□□ 0.59
RtcbQ99LF4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RtcbQ99LF4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Gm24543-201ENSMUST00000103867 82 ntBASIC18.71■□□□□ 0.59
RtcbQ99LF4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 AL593843.1-201ENSMUST00000195891 145 ntBASIC18.71■□□□□ 0.59
RtcbQ99LF4 Gm43433-201ENSMUST00000196573 481 ntBASIC18.71■□□□□ 0.59
RtcbQ99LF4 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RtcbQ99LF4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RtcbQ99LF4 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
RtcbQ99LF4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.7■□□□□ 0.58
RtcbQ99LF4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Gm6218-201ENSMUST00000219812 628 ntBASIC18.7■□□□□ 0.58
RtcbQ99LF4 AC130829.1-201ENSMUST00000221548 494 ntBASIC18.7■□□□□ 0.58
RtcbQ99LF4 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RtcbQ99LF4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.69■□□□□ 0.58
RtcbQ99LF4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Gm9719-201ENSMUST00000162765 543 ntBASIC18.69■□□□□ 0.58
RtcbQ99LF4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RtcbQ99LF4 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms